Index

A B C D E F G H I K L M N O P Q R S T U V X
All Classes All Packages

A

a - Variable in class edu.jas.gb.GroebnerBaseDistHybridMPITest
a - Variable in class edu.jas.gb.GroebnerBaseDistMPITest
ackTag - Static variable in class edu.jas.gb.GroebnerBaseDistributedHybridMPI: Message tag for acknowledgments.
ackTag - Static variable in class edu.jas.gb.HybridReducerClientMPI: Message tag for acknowledgments.
ackTag - Static variable in class edu.jas.gb.HybridReducerReceiverMPI: Message tag for acknowledgments.

B

b - Variable in class edu.jas.gb.GroebnerBaseDistHybridMPITest
b - Variable in class edu.jas.gb.GroebnerBaseDistMPITest
bbdist - Variable in class edu.jas.gb.GroebnerBaseDistHybridMPITest
bbdist - Variable in class edu.jas.gb.GroebnerBaseDistMPITest
bbdists - Variable in class edu.jas.gb.GroebnerBaseDistHybridMPITest
bbdists - Variable in class edu.jas.gb.GroebnerBaseDistMPITest
bbseq - Variable in class edu.jas.gb.GroebnerBaseDistHybridMPITest
bbseq - Variable in class edu.jas.gb.GroebnerBaseDistMPITest

C

c - Variable in class edu.jas.gb.GroebnerBaseDistHybridMPITest
c - Variable in class edu.jas.gb.GroebnerBaseDistMPITest
CHANTAG - Static variable in class edu.jas.util.MPIChannel
clear() - Method in class edu.jas.util.DistHashTableMPI: Clear the List.
clientPart(int) - Method in class edu.jas.gb.GroebnerBaseDistributedHybridMPI: GB distributed client.
clientPart(int) - Method in class edu.jas.gb.GroebnerBaseDistributedMPI: GB distributed client.
close() - Method in class edu.jas.util.MPIChannel: Closes the channel.
cmdline - Static variable in class edu.jas.kern.MPIEngine: Command line arguments.
cmdline - Static variable in class edu.jas.kern.MPIEngineTest
containsKey(Object) - Method in class edu.jas.util.DistHashTableMPI: Contains key.
containsValue(Object) - Method in class edu.jas.util.DistHashTableMPI: Contains value.

D

d - Variable in class edu.jas.gb.GroebnerBaseDistHybridMPITest
d - Variable in class edu.jas.gb.GroebnerBaseDistMPITest
debug - Variable in class edu.jas.gb.GroebnerBaseDistributedHybridMPI
debug - Variable in class edu.jas.gb.HybridReducerClientMPI
debug - Variable in class edu.jas.gb.HybridReducerReceiverMPI
debug - Variable in class edu.jas.gb.HybridReducerServerMPI
DEFAULT_THREADS - Static variable in class edu.jas.gb.GroebnerBaseDistributedHybridMPI: Default number of threads.
DEFAULT_THREADS - Static variable in class edu.jas.gb.GroebnerBaseDistributedMPI: Default number of threads.
DEFAULT_THREADS_PER_NODE - Static variable in class edu.jas.gb.GroebnerBaseDistributedHybridMPI: Default number of threads per compute node.
DHTMPIListener<K,V> - Class in edu.jas.util: Thread to comunicate with the other DHT lists.
DHTMPIListener(Comm, SocketChannel[], SortedMap<K, V>) - Constructor for class edu.jas.util.DHTMPIListener: Constructor.
DHTTAG - Static variable in class edu.jas.util.DistHashTableMPI: Message tag for DHT communicaton.
DistHashTableMPI<K,V> - Class in edu.jas.util: Distributed version of a HashTable using MPI.
DistHashTableMPI() - Constructor for class edu.jas.util.DistHashTableMPI: DistHashTableMPI.
DistHashTableMPI(String[]) - Constructor for class edu.jas.util.DistHashTableMPI: DistHashTableMPI.
DistHashTableMPI(Comm) - Constructor for class edu.jas.util.DistHashTableMPI: DistHashTableMPI.
DistHashTableMPITest - Class in edu.jas.util: DistHashTableMPI test with JUnit.
DistHashTableMPITest(String) - Constructor for class edu.jas.util.DistHashTableMPITest: Constructs a DistHashTableMPITest object.
doCheck - Static variable in class edu.jas.application.RunMPIGB: Check result GB if it is a GB.

E

e - Variable in class edu.jas.gb.GroebnerBaseDistHybridMPITest
e - Variable in class edu.jas.gb.GroebnerBaseDistMPITest
edu.jas.application - package edu.jas.application
edu.jas.gb - package edu.jas.gb
edu.jas.kern - package edu.jas.kern
edu.jas.util - package edu.jas.util
el - Variable in class edu.jas.gb.GroebnerBaseDistHybridMPITest
el - Variable in class edu.jas.gb.GroebnerBaseDistMPITest
engine - Static variable in class edu.jas.gb.GroebnerBaseDistHybridMPITest
engine - Static variable in class edu.jas.gb.GroebnerBaseDistMPITest
engine - Variable in class edu.jas.gb.GroebnerBaseDistributedHybridMPI
engine - Variable in class edu.jas.gb.GroebnerBaseDistributedMPI
engine - Static variable in class edu.jas.kern.MPIEngineTest
engine - Variable in class edu.jas.util.DistHashTableMPI
engine - Static variable in class edu.jas.util.DistHashTableMPITest
entrySet() - Method in class edu.jas.util.DistHashTableMPI: Get the entries as Set.
equals(Object) - Method in class edu.jas.util.DistHashTableMPI: Equals.

F

F - Variable in class edu.jas.gb.GroebnerBaseDistHybridMPITest
F - Variable in class edu.jas.gb.GroebnerBaseDistMPITest
fac - Variable in class edu.jas.gb.GroebnerBaseDistHybridMPITest
fac - Variable in class edu.jas.gb.GroebnerBaseDistMPITest

G

G - Variable in class edu.jas.gb.GroebnerBaseDistHybridMPITest
G - Variable in class edu.jas.gb.GroebnerBaseDistMPITest
GB(int, List<GenPolynomial<C>>) - Method in class edu.jas.gb.GroebnerBaseDistributedHybridMPI: Distributed Groebner base.
GB(int, List<GenPolynomial<C>>) - Method in class edu.jas.gb.GroebnerBaseDistributedMPI: Distributed Groebner base.
GBmaster(int, List<GenPolynomial<C>>) - Method in class edu.jas.gb.GroebnerBaseDistributedHybridMPI: Distributed hybrid Groebner base.
GBmaster(int, List<GenPolynomial<C>>) - Method in class edu.jas.gb.GroebnerBaseDistributedMPI: Distributed Groebner base, part for MPI master.
get(Object) - Method in class edu.jas.util.DistHashTableMPI: Get value under key from DHT.
getCommunicator() - Static method in class edu.jas.kern.MPIEngine: Get the MPI communicator.
getCommunicator(String[]) - Static method in class edu.jas.kern.MPIEngine: Get the MPI communicator.
getEngine() - Method in class edu.jas.util.MPIChannel: Get the MPI engine.
getList() - Method in class edu.jas.util.DistHashTableMPI: Get the internal sorted map.
getNF() - Method in class edu.jas.gb.MiMPIReducerServer: getNF.
getValueList() - Method in class edu.jas.util.DistHashTableMPI: Get the internal list, convert from Collection.
getWait(K) - Method in class edu.jas.util.DistHashTableMPI: Get value under key from DHT.
GroebnerBaseDistHybridMPITest - Class in edu.jas.gb: Distributed GroebnerBase MPI tests with JUnit.
GroebnerBaseDistHybridMPITest(String) - Constructor for class edu.jas.gb.GroebnerBaseDistHybridMPITest: Constructs a GroebnerBaseDistHybridMPITest object.
GroebnerBaseDistMPITest - Class in edu.jas.gb: Distributed GroebnerBase MPI tests with JUnit.
GroebnerBaseDistMPITest(String) - Constructor for class edu.jas.gb.GroebnerBaseDistMPITest: Constructs a GroebnerBaseDistMPITest object.
GroebnerBaseDistributedHybridMPI<C extends edu.jas.structure.RingElem<C>> - Class in edu.jas.gb: Groebner Base distributed hybrid algorithm with MPI.
GroebnerBaseDistributedHybridMPI() - Constructor for class edu.jas.gb.GroebnerBaseDistributedHybridMPI: Constructor.
GroebnerBaseDistributedHybridMPI(int) - Constructor for class edu.jas.gb.GroebnerBaseDistributedHybridMPI: Constructor.
GroebnerBaseDistributedHybridMPI(int, int) - Constructor for class edu.jas.gb.GroebnerBaseDistributedHybridMPI: Constructor.
GroebnerBaseDistributedHybridMPI(int, int, PairList<C>) - Constructor for class edu.jas.gb.GroebnerBaseDistributedHybridMPI: Constructor.
GroebnerBaseDistributedHybridMPI(int, int, ThreadPool) - Constructor for class edu.jas.gb.GroebnerBaseDistributedHybridMPI: Constructor.
GroebnerBaseDistributedHybridMPI(int, int, ThreadPool, PairList<C>) - Constructor for class edu.jas.gb.GroebnerBaseDistributedHybridMPI: Constructor.
GroebnerBaseDistributedHybridMPI(int, ThreadPool) - Constructor for class edu.jas.gb.GroebnerBaseDistributedHybridMPI: Constructor.
GroebnerBaseDistributedMPI<C extends edu.jas.structure.RingElem<C>> - Class in edu.jas.gb: Groebner Base distributed algorithm with MPI.
GroebnerBaseDistributedMPI() - Constructor for class edu.jas.gb.GroebnerBaseDistributedMPI: Constructor.
GroebnerBaseDistributedMPI(int) - Constructor for class edu.jas.gb.GroebnerBaseDistributedMPI: Constructor.
GroebnerBaseDistributedMPI(int, PairList<C>) - Constructor for class edu.jas.gb.GroebnerBaseDistributedMPI: Constructor.
GroebnerBaseDistributedMPI(int, ThreadPool) - Constructor for class edu.jas.gb.GroebnerBaseDistributedMPI: Constructor.
GroebnerBaseDistributedMPI(int, ThreadPool, PairList<C>) - Constructor for class edu.jas.gb.GroebnerBaseDistributedMPI: Constructor.

H

hashCode() - Method in class edu.jas.util.DistHashTableMPI: Hash code.
host - Variable in class edu.jas.gb.GroebnerBaseDistHybridMPITest
host - Variable in class edu.jas.gb.GroebnerBaseDistMPITest
hostNames - Static variable in class edu.jas.kern.MPIEngine: Hostnames of MPI partners.
hostSuf - Static variable in class edu.jas.kern.MPIEngine: Hostname suffix.
HybridReducerClientMPI<C extends edu.jas.structure.RingElem<C>> - Class in edu.jas.gb: Distributed clients reducing worker threads.
HybridReducerClientMPI(MPIChannel, DistHashTableMPI<Integer, GenPolynomial<C>>) - Constructor for class edu.jas.gb.HybridReducerClientMPI: Constructor.
HybridReducerReceiverMPI<C extends edu.jas.structure.RingElem<C>> - Class in edu.jas.gb: Distributed server receiving worker thread.
HybridReducerReceiverMPI(int, Terminator, AtomicInteger, MPIChannel, DistHashTableMPI<Integer, GenPolynomial<C>>, PairList<C>) - Constructor for class edu.jas.gb.HybridReducerReceiverMPI: Constructor.
HybridReducerServerMPI<C extends edu.jas.structure.RingElem<C>> - Class in edu.jas.gb: Distributed server reducing worker proxy threads.
HybridReducerServerMPI(int, int, Terminator, MPIChannel, DistHashTableMPI<Integer, GenPolynomial<C>>, PairList<C>) - Constructor for class edu.jas.gb.HybridReducerServerMPI: Constructor.

I

init() - Method in class edu.jas.util.DistHashTableMPI: Initialize and start the list thread.
isDone() - Method in class edu.jas.util.DHTMPIListener: Test if done.
isEmpty() - Method in class edu.jas.util.DistHashTableMPI: Is the List empty?
isRunning() - Static method in class edu.jas.kern.MPIEngine: Test if a pool is running.
iterator() - Method in class edu.jas.util.DistHashTableMPI: List key iterator.

K

keySet() - Method in class edu.jas.util.DistHashTableMPI: Get the keys as set.
kl - Variable in class edu.jas.gb.GroebnerBaseDistHybridMPITest
kl - Variable in class edu.jas.gb.GroebnerBaseDistMPITest

L

L - Variable in class edu.jas.gb.GroebnerBaseDistHybridMPITest
L - Variable in class edu.jas.gb.GroebnerBaseDistMPITest
listener - Variable in class edu.jas.util.DistHashTableMPI
ll - Variable in class edu.jas.gb.GroebnerBaseDistHybridMPITest
ll - Variable in class edu.jas.gb.GroebnerBaseDistMPITest

M

main(String[]) - Static method in class edu.jas.application.RunMPIGB: main method to be called from commandline
Usage: RunMPIGB [seq|par(+)|dist(+)|disthyb|cli] <file> #procs/#threadsPerNode [machinefile]
main(String[]) - Static method in class edu.jas.gb.GroebnerBaseDistHybridMPITest: main
main(String[]) - Static method in class edu.jas.gb.GroebnerBaseDistMPITest: main
main(String[]) - Static method in class edu.jas.kern.MPIEngineTest: main
main(String[]) - Static method in class edu.jas.util.DistHashTableMPITest: main.
MiMPIReducerServer<C extends edu.jas.structure.RingElem<C>> - Class in edu.jas.gb: Distributed server reducing worker threads for minimal GB Not jet distributed but threaded.
MiMPIReducerServer(List<GenPolynomial<C>>, GenPolynomial<C>) - Constructor for class edu.jas.gb.MiMPIReducerServer: Constructor.
minimalGB(List<GenPolynomial<C>>) - Method in class edu.jas.gb.GroebnerBaseDistributedHybridMPI: Minimal ordered groebner basis.
minimalGB(List<GenPolynomial<C>>) - Method in class edu.jas.gb.GroebnerBaseDistributedMPI: Minimal ordered groebner basis.
MPIChannel - Class in edu.jas.util: MPIChannel provides a communication channel for Java objects using MPI or TCP/IP to a given rank.
MPIChannel(Comm, int) - Constructor for class edu.jas.util.MPIChannel: Constructs a MPI channel on the given MPI engine.
MPIChannel(Comm, int, int) - Constructor for class edu.jas.util.MPIChannel: Constructs a MPI channel on the given MPI engine.
mpiComm - Static variable in class edu.jas.kern.MPIEngine: MPI communicator engine.
MPIEngine - Class in edu.jas.kern: MPI engine, provides global MPI service.
MPIEngineTest - Class in edu.jas.kern: MPIEngine tests with JUnit.
MPIEngineTest(String) - Constructor for class edu.jas.kern.MPIEngineTest: Constructs a MPIEngineTest object.
MPIReducerClient<C extends edu.jas.structure.RingElem<C>> - Class in edu.jas.gb: Distributed clients reducing worker threads.
MPIReducerClient(MPIChannel, DistHashTableMPI<Integer, GenPolynomial<C>>) - Constructor for class edu.jas.gb.MPIReducerClient: Constructor.
MPIReducerServer<C extends edu.jas.structure.RingElem<C>> - Class in edu.jas.gb: Distributed server reducing worker threads.
MPIReducerServer(int, Terminator, MPIChannel, DistHashTableMPI<Integer, GenPolynomial<C>>, PairList<C>) - Constructor for class edu.jas.gb.MPIReducerServer: Constructor.
mpjBug - Variable in class edu.jas.gb.GroebnerBaseDistHybridMPITest
mpjBug - Variable in class edu.jas.gb.GroebnerBaseDistMPITest

N

N_CPUS - Static variable in class edu.jas.kern.MPIEngine: Number of processors.
N_THREADS - Static variable in class edu.jas.kern.MPIEngine
NO_MPI - Static variable in class edu.jas.kern.MPIEngine: Flag for MPI usage.

O

onlyOnetestDistributedGBase() - Method in class edu.jas.gb.GroebnerBaseDistHybridMPITest: Test distributed GBase.

P

pairTag - Static variable in class edu.jas.gb.GroebnerBaseDistributedHybridMPI: Message tag for pairs.
pairTag - Static variable in class edu.jas.gb.HybridReducerClientMPI: Message tag for pairs.
pairTag - Static variable in class edu.jas.gb.HybridReducerServerMPI: Message tag for pairs.
pool - Variable in class edu.jas.gb.GroebnerBaseDistributedHybridMPI: Pool of threads to use.
pool - Variable in class edu.jas.gb.GroebnerBaseDistributedMPI
port - Variable in class edu.jas.gb.GroebnerBaseDistHybridMPITest
port - Variable in class edu.jas.gb.GroebnerBaseDistMPITest
put(K, V) - Method in class edu.jas.util.DistHashTableMPI: Put object to the distributed hash table.
putWait(K, V) - Method in class edu.jas.util.DistHashTableMPI: Put object to the distributed hash table.

Q

q - Variable in class edu.jas.gb.GroebnerBaseDistHybridMPITest
q - Variable in class edu.jas.gb.GroebnerBaseDistMPITest

R

rank - Variable in class edu.jas.gb.HybridReducerReceiverMPI
rank - Variable in class edu.jas.gb.HybridReducerServerMPI
rank - Variable in class edu.jas.gb.MPIReducerServer
receive() - Method in class edu.jas.util.MPIChannel: Receives an object.
receive(int) - Method in class edu.jas.util.MPIChannel: Receives an object.
resultTag - Static variable in class edu.jas.gb.GroebnerBaseDistributedHybridMPI: Message tag for results.
resultTag - Static variable in class edu.jas.gb.HybridReducerClientMPI: Message tag for results.
resultTag - Static variable in class edu.jas.gb.HybridReducerReceiverMPI: Message tag for results.
rl - Variable in class edu.jas.gb.GroebnerBaseDistHybridMPITest
rl - Variable in class edu.jas.gb.GroebnerBaseDistMPITest
run() - Method in class edu.jas.gb.HybridReducerClientMPI: Work loop.
run() - Method in class edu.jas.gb.HybridReducerReceiverMPI: Work loop.
run() - Method in class edu.jas.gb.HybridReducerServerMPI: Work loop.
run() - Method in class edu.jas.gb.MiMPIReducerServer: Main run method.
run() - Method in class edu.jas.gb.MPIReducerClient: Main run method.
run() - Method in class edu.jas.gb.MPIReducerServer: Main method.
run() - Method in class edu.jas.util.DHTMPIListener: run.
runHybridMpi(PolynomialList, int, int, String, int, boolean) - Static method in class edu.jas.application.RunMPIGB
runMpi(PolynomialList, int, String, int, boolean) - Static method in class edu.jas.application.RunMPIGB
RunMPIGB - Class in edu.jas.application: Simple setup to run a GB example in MPI environment.
RunMPIGB() - Constructor for class edu.jas.application.RunMPIGB

S

send(int, Object) - Method in class edu.jas.util.MPIChannel: Sends an object.
send(int, Object, int) - Method in class edu.jas.util.MPIChannel: Sends an object.
send(Object) - Method in class edu.jas.util.MPIChannel: Sends an object.
setCommandLine(String[]) - Static method in class edu.jas.kern.MPIEngine: Set the commandline.
setDone() - Method in class edu.jas.util.DHTMPIListener: Set to done status.
setMPI() - Static method in class edu.jas.kern.MPIEngine: Set MPI usage.
setNoMPI() - Static method in class edu.jas.kern.MPIEngine: Set no MPI usage.
setUp() - Method in class edu.jas.gb.GroebnerBaseDistHybridMPITest
setUp() - Method in class edu.jas.gb.GroebnerBaseDistMPITest
setUp() - Method in class edu.jas.kern.MPIEngineTest
setUp() - Method in class edu.jas.util.DistHashTableMPITest
size() - Method in class edu.jas.util.DistHashTableMPI: Size of the (local) list.
suite() - Static method in class edu.jas.gb.GroebnerBaseDistHybridMPITest: suite.
suite() - Static method in class edu.jas.gb.GroebnerBaseDistMPITest: suite.
suite() - Static method in class edu.jas.kern.MPIEngineTest: suite.
suite() - Static method in class edu.jas.util.DistHashTableMPITest: suite.

T

TAG - Static variable in class edu.jas.kern.MPIEngine: MPI engine base tag number.
tearDown() - Method in class edu.jas.gb.GroebnerBaseDistHybridMPITest
tearDown() - Method in class edu.jas.gb.GroebnerBaseDistMPITest
tearDown() - Method in class edu.jas.kern.MPIEngineTest
tearDown() - Method in class edu.jas.util.DistHashTableMPITest
terminate() - Method in class edu.jas.gb.GroebnerBaseDistributedHybridMPI: Cleanup and terminate.
terminate() - Method in class edu.jas.gb.GroebnerBaseDistributedMPI: Cleanup and terminate ThreadPool.
terminate() - Method in class edu.jas.gb.HybridReducerReceiverMPI: Terminate.
terminate() - Static method in class edu.jas.kern.MPIEngine: Stop execution.
terminate() - Method in class edu.jas.util.DistHashTableMPI: Terminate the list thread.
testCommunication() - Method in class edu.jas.kern.MPIEngineTest: Test communication.
testDistHashTable3() - Method in class edu.jas.util.DistHashTableMPITest: Tests if the two created DistHashTables have #n objects as content.
testDistributedGBase() - Method in class edu.jas.gb.GroebnerBaseDistMPITest: Test distributed GBase.
testMPIEngine() - Method in class edu.jas.kern.MPIEngineTest: Test MPIEngine.
testTrinks7GBase() - Method in class edu.jas.gb.GroebnerBaseDistHybridMPITest: Test Trinks7 GBase.
testTrinks7GBase() - Method in class edu.jas.gb.GroebnerBaseDistMPITest: Test Trinks7 GBase.
theList - Variable in class edu.jas.util.DistHashTableMPI
threads - Variable in class edu.jas.gb.GroebnerBaseDistHybridMPITest
threads - Variable in class edu.jas.gb.GroebnerBaseDistMPITest
threads - Variable in class edu.jas.gb.GroebnerBaseDistributedHybridMPI: Number of threads to use.
threads - Variable in class edu.jas.gb.GroebnerBaseDistributedMPI: Number of threads to use.
threadsPerNode - Variable in class edu.jas.gb.GroebnerBaseDistHybridMPITest
threadsPerNode - Variable in class edu.jas.gb.GroebnerBaseDistributedHybridMPI: Number of threads per node to use.
toString() - Method in class edu.jas.util.MPIChannel: to string.

U

useTCP - Static variable in class edu.jas.util.DistHashTableMPI: Transport layer.
useTCP - Static variable in class edu.jas.util.MPIChannel

V

valueIterator() - Method in class edu.jas.util.DistHashTableMPI: List value iterator.
values() - Method in class edu.jas.util.DistHashTableMPI: Get the values as Collection.

X

xtestDistHashTable1() - Method in class edu.jas.util.DistHashTableMPITest: Tests create and terminate DistHashTableMPI.
xtestDistHashTable2() - Method in class edu.jas.util.DistHashTableMPITest: Tests if the created DistHashTable has #n objects as content.

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